Plant Transposable Elements

1. So Many Repeats and So Little Time: How to Classify Transposable Elements
Thomas Wicker

2. Transposable Element Annotation in Completely Sequenced Eukaryote Genomes
Timothée Flutre, Emmanuelle Permal, Hadi Quesneville

3. Using Nextgen Sequencing to Investigate Genome Size Variation and Transposable Element Content
Concepcion Muñoz-Diez, Clémentine Vitte, Jeffrey Ross-Ibarra, Brandon S. Gaut, Maud I. Tenaillon

4. Genome-Wide Analysis of Transposition Using Next Generation Sequencing Technologies
Moaine Elbaidouri, Olivier Panaud

5. Hitching a Ride: Nonautonomous Retrotransposons and Parasitism as a Lifestyle
Alan H. Schulman

6. Plant Endogenous Retroviruses? A Case of Mysterious ORFs
Howard M. Laten, Garen D. Gaston

7. MITEs, Miniature Elements with a Major Role in Plant Genome Evolution
Hélène Guermonprez, Elizabeth Hénaff, Marta Cifuentes, Josep M. Casacuberta

8. Glue for Jumping Elements: Epigenetic Means for Controlling Transposable Elements in Plants
Thierry Pélissier, Olivier Mathieu

9. Responses of Transposable Elements to Polyploidy
Christian Parisod, Natacha Senerchia

10. Noise or Symphony: Comparative Evolutionary Analysis of Sugarcane Transposable Elements with Other Grasses
Nathalia Setta, Cushla J. Metcalfe, Guilherme M. Q. Cruz, Edgar A. Ochoa, Marie-Anne Sluys

11.
Helitron Proliferation and Gene-Fragment Capture
Yubin Li, Hugo K. Dooner

12. Transposable Element Exaptation in Plants
Douglas R. Hoen, Thomas E. Bureau

13. SINE Exaptation as Cellular Regulators Occurred Numerous Times During Eukaryote Evolution
Jean-Marc Deragon

14. LTR Retrotransposons as Controlling Elements of Genome Response to Stress?
Quynh Trang Bui, Marie-Angèle Grandbastien

15.
Rider Transposon Insertion and Phenotypic Change in Tomato
Ning Jiang, Sofia Visa, Shan Wu, Esther Knaap

16. Retrotransposons and the Eternal Leaves
Antonella Furini

Keywords: Life Sciences, Plant Genetics & Genomics, Plant Biochemistry, Nucleic Acid Chemistry, Cell Biology