Applied Genomics of Foodborne Pathogens

1. Role of Whole Genome Sequencing in the Public Health Surveillance of Foodborne Pathogens
Peter Gerner-Smidt, Heather Carleton, Eija Trees

2. Global Microbial Identifier
Peter R. Wielinga, Rene S. Hendriksen, Frank M. Aarestrup, Ole Lund, Saskia L. Smits, Marion P. G. Koopmans, Jørgen Schlundt

3. The Use of Whole Genome Sequencing for Surveillance of Enteric Organisms by United States Public Health Laboratories
David Boxrud, William J. Wolfgang

4. Bioinformatics Aspects of Foodborne Pathogen Research
Henk C. Bakker, Laura K. Strawn, Xiangyu Deng

5. The CGE Tool Box
Mette Voldby Larsen, Katrine G. Joensen, Ea Zankari, Johanne Ahrenfeldt, Oksana Lukjancenko, Rolf Sommer Kaas, Louise Roer, Pimlapas Leekitcharoenphon, Dhany Saputra, Salvatore Cosentino, Martin Christen Frølund Thomsen, Jose Luis Bellod Cisneros, Vanessa Jurtz, Simon Rasmussen, Thomas Nordahl Petersen, Henrik Hasman, Thomas Sicheritz-Ponten, Frank M. Aarestrup, Ole Lund

6. Genomic Diversity in Salmonella enterica

John Wain, Justin O’Grady

7. Verocytotoxin-Producing Escherichia coli in the Genomic Era: From Virulotyping to Pathogenomics
Valeria Michelacci, Rosangela Tozzoli, Alfredo Caprioli, Stefano Morabito

8. Campylobacter
Noel McCarthy

9. Genomics and Foodborne Viral Infections
Saskia L. Smits, Marion P. G. Koopmans

10. Transcriptomics and Proteomics of Foodborne Bacterial Pathogens
Joelle K. Salazar, Yun Wang, Wei Zhang

Keywords: Life Sciences, Food Microbiology, Food Science, Bioinformatics, Microbial Genetics and Genomics, Applied Microbiology