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Koch, Ina

Modeling in Systems Biology

Koch, Ina - Modeling in Systems Biology, ebook

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Ebook, PDF with Adobe DRM
ISBN: 9781849964746
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Table of contents

Part I. Foundations

1. Introduction
Ina Koch, Falk Schreiber

2. Biochemical Fundamentals
Tiina Liiving, Syed M. Baker, Björn H. Junker

3. Petri Nets
Wolfgang Reisig

Part II. Modeling Techniques

4. Discrete Modeling
Andrea Sackmann

5. Modeling Genetic Regulatory Networks
Richard Banks, Victor Khomenko, L. Jason Steggles

6. Hybrid Functional Petri Net with Extension forDynamic Pathway Modeling
Ayumu Saito, Masao Nagasaki, Hiroshi Matsuno, Satoru Miyano

7. Stochastic Modeling
Ivan Mura

8. Quantitative Analysis
Jörg Ackermann, Ina Koch

9. Fuzzy Modeling
Lukas Windhager, Florian Erhard, Ralf Zimmer

Part III. Biochemical Applications

10. Topological Analysis of Metabolic andRegulatory Networks
Stefan Schuster, Björn H. Junker

11. Analysis of Dynamical Models of Signaling Networks with Petri Nets and Dynamic Graphs
Simon Hardy, Ravi Iyengar

12. A Modular, Qualitative Modeling of Regulatory Networks Using Petri Nets
Claudine Chaouiya, Hanna Klaudel, Franck Pommereau

13. A Case Study of HFPN Simulation: Finding Essential Roles ofRor Gene in the Interaction ofFeedback Loops inMammalian Circadian Clock
Natsumi Mitou, Hiroshi Matsuno, Satoru Miyano, Shin-Ichi T. Inouye

14. Prediction of Network Structure
Annegret Wagler

Keywords: Computer Science, Computational Biology/Bioinformatics, Systems Biology

Author(s)
 
 
Publisher
Springer
Publication year
2011
Language
en
Edition
1
Series
Computational Biology
Page amount
387 pages
Category
Information Technology, Telecommunications
Format
Ebook
eISBN (PDF)
9781849964746

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