Frontiers in Computational and Systems Biology

1. Analysis of Combinatorial Gene Regulation withThermodynamic Models
Chieh-Chun Chen, Sheng Zhong

2. RNA Secondary Structure Prediction and Gene Regulation by Small RNAs
Ye Ding

3. Some Critical Data Quality Control Issues ofOligoarrays
Wenjiang J. Fu, Ming Li, Yalu Wen, Likit Preeyanon

4. Stochastic-Process Approach to Nonequilibrium Thermodynamics and Biological Signal Transduction
Hao Ge

5. Granger Causality: Theory and Applications
Shuixia Guo, Christophe Ladroue, Jianfeng Feng

6. Transcription Factor Binding Site Identification by Phylogenetic Footprinting
Haiyan Hu, Xiaoman Li

7. Learning Network from High-Dimensional Array Data
Li Hsu, Jie Peng, Pei Wang

8. Computational Methods for Predicting Domain–Domain Interactions
Hyunju Lee, Ting Chen, Fengzhu Sun

9. Irreversible Stochastic Processes, Coupled Diffusions and Systems Biochemistry
Pei-Zhe Shi, Hong Qian

10. Probability Modeling and Statistical Inference inPeriodic Cancer Screening
Dongfeng Wu, Gary L. Rosner

11. On Construction of the Smallest One-sided Confidence Intervals and Its Application inIdentifying theMinimum Effective Dose
Weizhen Wang

12. Group Variable Selection Methods andTheirApplications inAnalysis of Genomic Data
Jun Xie, Lingmin Zeng

13. Modeling Protein-Signaling Networks withGranger Causality Test
Wenqiang Yang, Qiang Luo

14. DNA Copy Number Profiling in Normal andTumor Genomes
Nancy R. Zhang

15. Spatial Disease Surveillance: Methods andApplications
Tonglin Zhang

16. From QTL Mapping to eQTL Analysis
Wei Zhang, Jun S. Liu

17. An Evaluation of Gene Module Concepts intheInterpretation of Gene Expression Data
Xianghua Zhang, Hongyu Zhao

18. Readout of Spike Waves in a Microcolumn
Xuejuan Zhang

19. False Positive Control for Genome-Wide ChIP-Chip Tiling Arrays
Yu Zhang

Keywords: Computer Science, Computational Biology/Bioinformatics, Systems Biology, Statistics and Computing/Statistics Programs, Probability and Statistics in Computer Science