Functional Coherence of Molecular Networks in Bioinformatics

1. Introduction to Network Biology
Mehmet Koyutürk, Shankar Subramaniam, Ananth Grama

2. Topological Characteristics of Molecular Networks
Tijana Milenković, Nataša Pržulj

3. Function Annotation in Gene Networks
Petko Bogdanov, Kathy Macropol, Ambuj K. Singh

4. Proteome Network Emulating Models
Phuong Dao, Fereydoun Hormozdiari, Iman Hajirasouliha, Martin Ester, S. Cenk Sahinalp

5. Biological Network Alignment
Shahin Mohammadi, Ananth Grama

6. Pattern Mining Across Many Massive Biological Networks
Wenyuan Li, Haiyan Hu, Yu Huang, Haifeng Li, Michael R. Mehan, Juan Nunez-Iglesias, Min Xu, Xifeng Yan, Xianghong Jasmine Zhou

7. Molecular Networks and Complex Diseases
Mehmet Koyutürk, Sinan Erten, Salim A. Chowdhury, Rod K. Nibbe, Mark R. Chance

8. Moving Toward Genome-Scale Kinetic Models: The Mass Action Stoichiometric Simulation Approach
Aarash Bordbar, Bernhard Ø. Palsson

Keywords: Life Sciences, Systems Biology, Computational Biology/Bioinformatics, Computer Science, general, Biomedical Engineering