Recoding: Expansion of Decoding Rules Enriches Gene Expression

1. Selenocysteine Biosynthesis, Selenoproteins, and Selenoproteomes
Vadim N. Gladyshev, Dolph L. Hatfield

2. Reprogramming the Ribosome for Selenoprotein Expression: RNA Elements and Protein Factors
Marla J. Berry, Michael T. Howard

3. Translation of UAG as Pyrrolysine
Joseph A. Krzycki

4. Specification of Standard Amino Acids by Stop Codons
Olivier Namy, Jean-Pierre Rousset

5. Ribosome “Skipping”: “Stop-Carry On” or “StopGo” Translation
Jeremy D. Brown, Martin D. Ryan

6. Recoding Therapies for Genetic Diseases
Kim M. Keeling, David M. Bedwell

7. Pseudoknot-Dependent Programmed —1 Ribosomal Frameshifting: Structures, Mechanisms and Models
Ian Brierley, Robert J.C. Gilbert, Simon Pennell

8. Programmed —1 Ribosomal Frameshift in the Human Immunodeficiency Virus of Type 1
Léa Brakier-Gingras, Dominic Dulude

9. Ribosomal Frameshifting in Decoding Plant Viral RNAs
W. Allen Miller, David P. Giedroc

10. Programmed Frameshifting in Budding Yeast
Philip J. Farabaugh

11. Recoding in Bacteriophages
Roger W. Hendrix

12. Programmed Ribosomal −1 Frameshifting as a Tradition: The Bacterial Transposable Elements of the IS3 Family
Olivier Fayet, Marie-Françoise Prère

13. Autoregulatory Frameshifting in Antizyme Gene Expression Governs Polyamine Levels from Yeast to Mammals
Ivaylo P. Ivanov, Senya Matsufuji

14. Sequences Promoting Recoding Are Singular Genomic Elements
Pavel V. Baranov, Olga Gurvich

15. Mutants That Affect Recoding
Jonathan D. Dinman, Michael O’Connor

16. The E Site and Its Importance for Improving Accuracy and Preventing Frameshifts
Markus Pech, Oliver Vesper, Hiroshi Yamamoto, Daniel N. Wilson, Knud H. Nierhaus

17. Translational Bypassing – Peptidyl-tRNA Re-pairing at Non-overlapping Sites
Norma M. Wills

18.
trans-Translation
Kenneth C. Keiler, Dennis M. Lee

19. Transcript Slippage and Recoding
Michael Anikin, Vadim Molodtsov, Dmitry Temiakov, William T. McAllister

20. Computational Resources for Studying Recoding
Andrew E. Firth, Michaël Bekaert, Pavel V. Baranov

Keywords: Life Sciences, Microbiology, Human Genetics, Biochemistry, general, Cell Biology