Medical Informatics

Unit I. Foundational Topics in Medical Informatics

1. Knowledge Management, Data Mining, and Text Mining in Medical Informatics
Hsinchun Chen, Sherrilynne S. Fuller, Carol Friedman, William Hersh

2. Mapping Medical Informatics Research
Shauna Eggers, Zan Huang, Hsinchun Chen, Lijun Yan, Cathy Larson, Asraa Rashid, Michael Chau, Chienting Lin

3. Bioinformatics Challenges and Opportunities
Peter Tarczy-Hornoch, Mark Minie

4. Managing Information Security and Privacy in Healthcare Data Mining
Ted Cooper, Jeff Collman

5. Ethical and Social Challenges of Electronic Health Information
Peter S. Winkelstein

Unit II. Information and Knowledge Management

6. Medical Concept Representation
Christopher G. Chute

7. Characterizing Biomedical Concept Relationships
Debra Revere, Sherrilynne S. Fuller

8. Biomedical Ontologies
Olivier Bodenreider, Anita Burgun

9. Information Retrieval and Digital Libraries
William R. Hersh

10. Modeling Text Retrieval in Biomedicine
W. John Wilbur

11. Public Access to Anatomic Images
George R. Thoma

12. 3D Medical Informatics
Terry S. Yoo

13. Infectious Diseaxe Informatics and Outbreak detection
Daniel Zeng, Hsinchun Chen, Cecil Lynch, Millicent Eidson, Ivan Gotham

Unit III. Text Mining and Data Mining

14. Semantic Interpretation for the Biomedical Research Literature
Thomas C. Rindflesch, Marcelo Fiszman, Bisharah Libbus

15. Semantic Text Parsing for Patient Records
Carol Friedman

16. Identification of Biological Relationships from Text Documents
Mathew Palakal, Snehasis Mukhopadhyay, Matthew Stephens

17. Creating, Modeling, and Visualizing Metabolic Networks
Julie A. Dickerson, Daniel Berleant, Pan Du, Jing Ding, Carol M. Foster, Ling Li, Eve Syrkin Wurtele

18. Gene Pathway Text Mining and Visualization
Daniel M. McDonald, Hua Su, Jennifer Xu, Chun-Ju Tseng, Hsinchun Chen, Gondy Leroy

19. The Genomic Data Mine
Lorraine Tanabe

20. Exploratory Genomic Data Analysis
Larry Smith

21. Joint Learning Using Multiple Types of Data and Knowledge
Zan Huang, Hua Su, Hsinchun Chen

Keywords: Medicine & Public Health, Health Informatics, Business Information Systems, Bioinformatics, Information Systems and Communication Service, Biomedical Engineering, Electronic Commerce/e-business