Problem Solving Handbook in Computational Biology and Bioinformatics

1. Modern BLAST Programs
Jian Ma, Louxin Zhang

2. Practical Multiple Sequence Alignment
Tobias Rausch, Knut Reinert

3. Sequence Alignment Statistics
John L. Spouge

4. Practical Implications of Coalescent Theory
Paul Marjoram, Paul Joyce

5. Graph Model of Coalescence with Recombinations
Laxmi Parida

6. Phylogenetic Trees From Sequences
Paul Ryvkin, Li-San Wang

7. Evolutionary Phylogenetic Networks: Models and Issues
Luay Nakhleh

8. Genome Wide Association Studies
Paola Sebastiani, Nadia Solovieff

9. Novel Perspectives on Protein Structure Prediction
Bonnie Berger, Jéerôme Waldispühl

10. Stochastic Simulation for Biochemical Systems
Yang Cao

11. Cellular Response Networks
Christopher D. Lasher, Christopher L. Poirel, T. M. Murali

12. Identification of Modules in Protein-Protein Interaction Networks
Sinan Erten, Mehmet Koyutürk

13. Designing Microarray Experiments
Paola Sebastiani, Jacqui Milton, Ling Wang

14. Matrix and Tensor Decompositions
Karthik Devarajan

15. Practical Applications of the Gene Ontology Resource
Rachael P. Huntley, Emily C. Dimmer, Rolf Apweiler

Keywords: Computer Science, Computational Biology/Bioinformatics, Algorithm Analysis and Problem Complexity, Bioinformatics