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RSSMathematics of DNA Structure, Function and Interactions | ||||||||||||||||||||||
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| Table of contents 2. Nick Cozzarelli: A Personal Remembrance Stephen D. Levene, Lynn Zechiedrich 3. Mathematical Methods in Dna Topology: Applications to Chromosome Organization and Site-Specific Recombination Javier Arsuaga, Yuanan Diao, Mariel Vazquez 4. Conformational Statistics of Dna and Diffusion Equations on The Euclidean Group Gregory S. Chirikjian 5. Perspectives On DNA Looping Laura Finzi 6. Differences Between Positively and Negatively Supercoiled DNA that Topoisomerases May Distinguish Jonathan M. Fogg, Daniel J. Catanese, Graham L. Randall, Michelle C. Swick, Lynn Zechiedrich 7. Calibration of Tethered Particle Motion Experiments Lin Han, Bertrand H. Lui, Seth Blumberg, John F. Beausang, Philip C. Nelson, Rob Phillips 8. Difference Topology: Analysis of High-Order DNA-Protin Assemblies Makkuni Jayaram, Rasika Harshey 9. Useful Intrusions of DNA Topology Into Experiments on Protein-DNA Geometry Jason D. Kahn, James R. Jenssen, Vasavi Vittal 10. Topological Analysis of DNA-Protein Complexes Soojeong Kim, Isabel K. Darcy 11. Closing the Loop on Protein-DNA Interactions: Interplay Between Shape and Flexibility in Nucleoprotein Assemblies Having Implications for Biological Regulation Stephen D. Levene, Yongli Zhang 12. Four-Way Helical Junctions in DNA Molecules David M.J. Lilley 13. Micromechanics of Single Supercoiled DNA Molecules John F. Marko 14. Flexibility Of Nucleosomes On Topologically Constrained DNA Andrei Sivolob, Christophe Lavelle, Ariel Prunell 15. The Mathematics of DNA Sturcture, Mechanics, and Dynamics David Swigon 16. Paradox Regained: a Topological Coupling of Nuclesomal DNA Wrapping and Chromatin Fibre Coiling Andrew Travers 17. Statistical-Mechanical Analysis of Enzymatic Topological Transformations in DNA Molecules Alexander Vologodskii | ||||||||||||||||||||||
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